Continued DataONE collaboration with CitSci.org

Coming soon .. DataONE postdoc Yiwei Wang will be working with members of CitSci.org on their metadata standards project and writing about her research activities here.  DataONE previously had an active Citizen Science Working Group and postdoc, Andrea Wiggins, working with us and it is wonderful that we can continue supporting this Continue reading Continued DataONE collaboration with CitSci.org

Week 9 – The road ahead

As mentioned last week, we’d like to develop our own tool to capture provenance information of digital notebooks, so writing an iPython extension is good choice. An iPython extension is like an user defined library, and defined APIs can be registered that they can be invoked in the notebook as functions. So following Continue reading Week 9 – The road ahead

Week 8 – Notebook provenance

As we’re approaching the end of this summer project, it’s time to think about the end game. We’re targeting to study the provenance of notebooks and we choose iPython notebook as a use case and we studied NoWorkflow system in detail, so it’s natural to combine these two together. Since Continue reading Week 8 – Notebook provenance

Week 7 – Provenance questions

Let’s continue on the front of capturing provenance information on the Python script that visualizes a NetCDF file, using NoWorkflow system. In previous blogs, I mentioned that NoWorkflow provenance has three types: definition, development and execution. For execution provenance, only function activation and file access information are captured, there is not very Continue reading Week 7 – Provenance questions

ONEMercury Tutorials – Screencast Tutorials, Final Post

Over the course of the summer internship, some things went better than others, but, overall, challenges were minor. I am grateful for the experience, having learned a great deal about metadata, data curation, the field of technical writing and training, and video production. In addition to providing feedback on the Continue reading ONEMercury Tutorials – Screencast Tutorials, Final Post